Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 KRT18P38-201ENST00000449496 1282 ntBASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 AL136038.4-201ENST00000603606 1261 ntBASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 AC006011.2-201ENST00000621313 1158 ntBASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 AL031432.5-201ENST00000641059 760 ntBASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHB18PQ96TA0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 STARP1-201ENST00000397973 869 ntBASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 HLA-F-220ENST00000434407 884 ntBASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 AC024563.2-201ENST00000603282 481 ntBASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHB18PQ96TA0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 AC113404.2-201ENST00000507884 177 ntBASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHB18PQ96TA0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms