Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC002310.6-201ENST00000624451 1377 ntBASIC16.23■□□□□ 0.19
SPENQ96T58 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 ABCD1P5-201ENST00000445663 754 ntBASIC16.23■□□□□ 0.19
SPENQ96T58 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.23■□□□□ 0.19
SPENQ96T58 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.23■□□□□ 0.19
SPENQ96T58 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.23■□□□□ 0.19
SPENQ96T58 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.23■□□□□ 0.19
SPENQ96T58 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 MIR149-201ENST00000384879 89 ntBASIC16.23■□□□□ 0.19
SPENQ96T58 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.23■□□□□ 0.19
SPENQ96T58 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 AC064836.3-201ENST00000607928 673 ntBASIC16.23■□□□□ 0.19
SPENQ96T58 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 AC108751.1-201ENST00000490852 363 ntBASIC16.22■□□□□ 0.19
SPENQ96T58 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.22■□□□□ 0.19
SPENQ96T58 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SPENQ96T58 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SPENQ96T58 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.22■□□□□ 0.19
SPENQ96T58 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.22■□□□□ 0.19
SPENQ96T58 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.22■□□□□ 0.19
SPENQ96T58 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.22■□□□□ 0.19
SPENQ96T58 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.22■□□□□ 0.19
SPENQ96T58 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.22■□□□□ 0.19
SPENQ96T58 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.22■□□□□ 0.19
SPENQ96T58 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 MTDHP4-201ENST00000600287 670 ntBASIC16.22■□□□□ 0.19
SPENQ96T58 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.22■□□□□ 0.19
SPENQ96T58 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPENQ96T58 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 LAGE3P1-201ENST00000425356 484 ntBASIC16.21■□□□□ 0.19
SPENQ96T58 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.21■□□□□ 0.19
SPENQ96T58 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
SPENQ96T58 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SPENQ96T58 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.21■□□□□ 0.19
SPENQ96T58 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SPENQ96T58 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.21■□□□□ 0.19
SPENQ96T58 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 ELL2P1-201ENST00000413990 1906 ntBASIC16.21■□□□□ 0.19
SPENQ96T58 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.21■□□□□ 0.19
SPENQ96T58 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.21■□□□□ 0.19
SPENQ96T58 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.21■□□□□ 0.19
SPENQ96T58 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
SPENQ96T58 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPENQ96T58 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.21■□□□□ 0.19
SPENQ96T58 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.21■□□□□ 0.18
SPENQ96T58 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SPENQ96T58 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SPENQ96T58 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPENQ96T58 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.21■□□□□ 0.18
SPENQ96T58 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SPENQ96T58 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
SPENQ96T58 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SPENQ96T58 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPENQ96T58 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SPENQ96T58 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms