Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 AC018470.1-201ENST00000624790 3129 ntBASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HIST1H2AAQ96QV6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.71■□□□□ 0.1
HIST1H2AAQ96QV6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 ESPNP-201ENST00000270691 2015 ntBASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 AC093677.2-201ENST00000600169 1863 ntBASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 INGX-201ENST00000359239 846 ntBASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 AC009947.2-201ENST00000444014 672 ntBASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.7■□□□□ 0.1
HIST1H2AAQ96QV6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 FLJ16779-201ENST00000612722 7638 ntBASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 LIN28AP1-201ENST00000429574 405 ntBASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 NEK4P2-201ENST00000580004 1012 ntBASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 AC092865.7-201ENST00000641832 219 ntBASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
HIST1H2AAQ96QV6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms