Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MS4A4EQ96PG1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
MS4A4EQ96PG1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.89■□□□□ 0.3
MS4A4EQ96PG1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 GNAS-203ENST00000306120 1878 ntBASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 KRT89P-201ENST00000620027 1478 ntBASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 AC113404.2-201ENST00000507884 177 ntBASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 DUTP2-201ENST00000519164 463 ntBASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 AC024563.2-201ENST00000603282 481 ntBASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 AL391807.1-203ENST00000604392 2365 ntBASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.89■□□□□ 0.29
MS4A4EQ96PG1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 LINC00167-201ENST00000530583 1419 ntBASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 KRT18P55-202ENST00000578578 1546 ntBASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 FAM8A6P-201ENST00000407496 1135 ntBASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 AC079602.3-201ENST00000623931 403 ntBASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.88■□□□□ 0.29
MS4A4EQ96PG1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 RNF152P1-201ENST00000397754 604 ntBASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 HOMER2P1-201ENST00000455653 964 ntBASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 AC006011.2-201ENST00000621313 1158 ntBASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MS4A4EQ96PG1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms