Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
C9orf72Q96LT7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
C9orf72Q96LT7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.64■□□□□ 0.58
C9orf72Q96LT7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
C9orf72Q96LT7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.64■□□□□ 0.58
C9orf72Q96LT7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 SLC25A1P4-201ENST00000567977 778 ntBASIC18.64■□□□□ 0.57
C9orf72Q96LT7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 AC092865.7-201ENST00000641832 219 ntBASIC18.64■□□□□ 0.57
C9orf72Q96LT7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 AC009053.2-201ENST00000563701 2365 ntBASIC18.64■□□□□ 0.57
C9orf72Q96LT7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 AC099398.1-201ENST00000567919 2776 ntBASIC18.64■□□□□ 0.57
C9orf72Q96LT7 AC108860.2-201ENST00000562760 2183 ntBASIC18.64■□□□□ 0.57
C9orf72Q96LT7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
C9orf72Q96LT7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 SDHAP2-201ENST00000455183 2001 ntBASIC18.63■□□□□ 0.57
C9orf72Q96LT7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 AC005521.1-201ENST00000393351 872 ntBASIC18.63■□□□□ 0.57
C9orf72Q96LT7 AC113347.1-201ENST00000413321 391 ntBASIC18.63■□□□□ 0.57
C9orf72Q96LT7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 PRORSD1P-202ENST00000563365 2154 ntBASIC18.63■□□□□ 0.57
C9orf72Q96LT7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
C9orf72Q96LT7 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 OR6D1P-202ENST00000641007 5290 ntBASIC18.62■□□□□ 0.57
C9orf72Q96LT7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
C9orf72Q96LT7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms