Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ITCHQ96J02 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.25■□□□□ 0.35
ITCHQ96J02 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.25■□□□□ 0.35
ITCHQ96J02 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 AP003041.3-201ENST00000527151 707 ntBASIC17.25■□□□□ 0.35
ITCHQ96J02 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.25■□□□□ 0.35
ITCHQ96J02 AC233702.5-201ENST00000584107 538 ntBASIC17.25■□□□□ 0.35
ITCHQ96J02 AL023803.3-201ENST00000615559 522 ntBASIC17.25■□□□□ 0.35
ITCHQ96J02 CR769767.2-201ENST00000622735 460 ntBASIC17.25■□□□□ 0.35
ITCHQ96J02 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ITCHQ96J02 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.25■□□□□ 0.35
ITCHQ96J02 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITCHQ96J02 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ITCHQ96J02 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ITCHQ96J02 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ITCHQ96J02 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.24■□□□□ 0.35
ITCHQ96J02 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.24■□□□□ 0.35
ITCHQ96J02 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 AL353719.1-201ENST00000566847 864 ntBASIC17.24■□□□□ 0.35
ITCHQ96J02 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 MIR3180-4-201ENST00000582223 153 ntBASIC17.24■□□□□ 0.35
ITCHQ96J02 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.24■□□□□ 0.35
ITCHQ96J02 AC026471.5-201ENST00000615068 467 ntBASIC17.24■□□□□ 0.35
ITCHQ96J02 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.24■□□□□ 0.35
ITCHQ96J02 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.24■□□□□ 0.35
ITCHQ96J02 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ITCHQ96J02 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ITCHQ96J02 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITCHQ96J02 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ITCHQ96J02 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ITCHQ96J02 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ITCHQ96J02 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ITCHQ96J02 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.23■□□□□ 0.35
ITCHQ96J02 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 PRORSD1P-201ENST00000295112 541 ntBASIC17.23■□□□□ 0.35
ITCHQ96J02 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.23■□□□□ 0.35
ITCHQ96J02 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.23■□□□□ 0.35
ITCHQ96J02 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ITCHQ96J02 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ITCHQ96J02 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ITCHQ96J02 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms