Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 RPS2P55-201ENST00000397318 883 ntBASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 AC107956.1-201ENST00000494359 873 ntBASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 NUDT16P1-203ENST00000513809 620 ntBASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 DGCR10-201ENST00000609839 495 ntBASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC47A1Q96FL8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC47A1Q96FL8 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 KRT8P50-201ENST00000562022 1438 ntBASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 MIR564-202ENST00000385049 94 ntBASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 AC012618.2-201ENST00000428058 849 ntBASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 AC116562.2-201ENST00000507042 360 ntBASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 AD000864.1-201ENST00000624076 2295 ntBASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC47A1Q96FL8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 AL023806.1-201ENST00000603994 1649 ntBASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 AC099343.3-201ENST00000605834 2503 ntBASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 ABHD17AP1-201ENST00000358206 933 ntBASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC47A1Q96FL8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms