Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.22■□□□□ 0.35
LRRC58Q96CX6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 MFAP1P1-201ENST00000442257 1255 ntBASIC17.22■□□□□ 0.35
LRRC58Q96CX6 CA15P1-201ENST00000481698 905 ntBASIC17.22■□□□□ 0.35
LRRC58Q96CX6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 AL138688.1-201ENST00000624851 1594 ntBASIC17.22■□□□□ 0.35
LRRC58Q96CX6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LRRC58Q96CX6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 C1QBPP2-201ENST00000528754 825 ntBASIC17.21■□□□□ 0.35
LRRC58Q96CX6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LRRC58Q96CX6 NKILA-202ENST00000614771 2598 ntBASIC17.21■□□□□ 0.35
LRRC58Q96CX6 KRT8P7-201ENST00000533003 1432 ntBASIC17.21■□□□□ 0.34
LRRC58Q96CX6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.21■□□□□ 0.34
LRRC58Q96CX6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
LRRC58Q96CX6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC58Q96CX6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AC133963.1-201ENST00000504166 1679 ntBASIC17.2■□□□□ 0.34
LRRC58Q96CX6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 SLC25A1P4-201ENST00000567977 778 ntBASIC17.2■□□□□ 0.34
LRRC58Q96CX6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 MIR4674-201ENST00000582457 87 ntBASIC17.2■□□□□ 0.34
LRRC58Q96CX6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC58Q96CX6 AC006058.3-201ENST00000606217 1069 ntBASIC17.2■□□□□ 0.34
LRRC58Q96CX6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms