Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 AL096865.1-201ENST00000606796 927 ntBASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM43Q96BQ3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 AC010460.3-201ENST00000511359 1579 ntBASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 TSEN15P1-201ENST00000423257 515 ntBASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 AC004790.2-201ENST00000623588 572 ntBASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM43Q96BQ3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 AC122714.2-201ENST00000502787 707 ntBASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 IGHV3-65-201ENST00000523210 341 ntBASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM43Q96BQ3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM43Q96BQ3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM43Q96BQ3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.52■□□□□ 0.71
TRIM43Q96BQ3 AL499627.1-201ENST00000569373 2188 ntBASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 IGLL3P-201ENST00000412472 434 ntBASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 PRSS29P-201ENST00000440800 595 ntBASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms