Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.3■□□□□ 0.68
SHC3Q92529 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC3Q92529 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHC3Q92529 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC3Q92529 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SHC3Q92529 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.3■□□□□ 0.68
SHC3Q92529 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC3Q92529 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SHC3Q92529 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC3Q92529 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 AC022898.2-201ENST00000616822 1312 ntBASIC19.29■□□□□ 0.68
SHC3Q92529 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC3Q92529 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.29■□□□□ 0.68
SHC3Q92529 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.29■□□□□ 0.68
SHC3Q92529 AC004263.2-201ENST00000617183 678 ntBASIC19.29■□□□□ 0.68
SHC3Q92529 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.29■□□□□ 0.68
SHC3Q92529 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SHC3Q92529 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.29■□□□□ 0.68
SHC3Q92529 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHC3Q92529 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
SHC3Q92529 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.28■□□□□ 0.68
SHC3Q92529 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SHC3Q92529 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.28■□□□□ 0.68
SHC3Q92529 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 IGHGP-201ENST00000390555 1178 ntBASIC19.28■□□□□ 0.68
SHC3Q92529 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.28■□□□□ 0.68
SHC3Q92529 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.28■□□□□ 0.68
SHC3Q92529 SPDYE13P-201ENST00000445314 798 ntBASIC19.28■□□□□ 0.68
SHC3Q92529 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.28■□□□□ 0.68
SHC3Q92529 AC092647.4-201ENST00000457211 535 ntBASIC19.28■□□□□ 0.68
SHC3Q92529 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.28■□□□□ 0.68
SHC3Q92529 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 VENTXP5-201ENST00000523979 775 ntBASIC19.28■□□□□ 0.68
SHC3Q92529 AC022616.7-201ENST00000525383 220 ntBASIC19.28■□□□□ 0.68
SHC3Q92529 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.28■□□□□ 0.68
SHC3Q92529 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.28■□□□□ 0.68
SHC3Q92529 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.28■□□□□ 0.68
SHC3Q92529 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.28■□□□□ 0.68
SHC3Q92529 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
SHC3Q92529 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.28■□□□□ 0.68
SHC3Q92529 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.28■□□□□ 0.68
SHC3Q92529 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SHC3Q92529 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.28■□□□□ 0.68
SHC3Q92529 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.27■□□□□ 0.68
SHC3Q92529 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
SHC3Q92529 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.27■□□□□ 0.68
SHC3Q92529 LINC00896-202ENST00000609602 2128 ntBASIC19.27■□□□□ 0.68
SHC3Q92529 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SHC3Q92529 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.27■□□□□ 0.68
SHC3Q92529 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.27■□□□□ 0.68
SHC3Q92529 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SHC3Q92529 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms