Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 RNF126P1-202ENST00000569893 925 ntBASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 REXO1L9P-201ENST00000604264 2108 ntBASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 LINC00602-201ENST00000629776 2065 ntBASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC148Q8NFR7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 Z83836.1-201ENST00000624605 1642 ntBASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC148Q8NFR7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
CCDC148Q8NFR7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC148Q8NFR7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC148Q8NFR7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC148Q8NFR7 AL353692.3-201ENST00000407031 1396 ntBASIC20.83■□□□□ 0.92
CCDC148Q8NFR7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC148Q8NFR7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 AC132938.6-201ENST00000623828 1655 ntBASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC148Q8NFR7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC148Q8NFR7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms