Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 LINC01023-201ENST00000606054 436 ntBASIC16.95■□□□□ 0.3
NUP43Q8NFH3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.95■□□□□ 0.3
NUP43Q8NFH3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 AC073508.3-201ENST00000619697 1419 ntBASIC16.95■□□□□ 0.3
NUP43Q8NFH3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.95■□□□□ 0.3
NUP43Q8NFH3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 KRT18P57-201ENST00000443599 1254 ntBASIC16.94■□□□□ 0.3
NUP43Q8NFH3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 YBX1P2-201ENST00000489612 999 ntBASIC16.94■□□□□ 0.3
NUP43Q8NFH3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.94■□□□□ 0.3
NUP43Q8NFH3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NUP43Q8NFH3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 AC117947.1-201ENST00000427448 529 ntBASIC16.93■□□□□ 0.3
NUP43Q8NFH3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.93■□□□□ 0.3
NUP43Q8NFH3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 AC134043.2-201ENST00000624206 2238 ntBASIC16.93■□□□□ 0.3
NUP43Q8NFH3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NUP43Q8NFH3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NUP43Q8NFH3 AL391807.1-203ENST00000604392 2365 ntBASIC16.92■□□□□ 0.3
NUP43Q8NFH3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms