Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 AC091607.1-201ENST00000490318 1060 ntBASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 AL353801.3-201ENST00000609898 542 ntBASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
C9orf40Q8IXQ3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 AC233702.3-201ENST00000578656 1387 ntBASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 AP000997.3-201ENST00000623333 2250 ntBASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 AC112698.1-201ENST00000510299 916 ntBASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 AP005901.3-202ENST00000581653 237 ntBASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.66■□□□□ 0.26
C9orf40Q8IXQ3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 AC246785.2-201ENST00000432512 513 ntBASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 AP000867.3-201ENST00000524675 377 ntBASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 AC011840.4-201ENST00000578471 627 ntBASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.65■□□□□ 0.26
C9orf40Q8IXQ3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms