Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC084018.2-201ENST00000613093 2607 ntBASIC18■□□□□ 0.47
NUDCD3Q8IVD9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 B3GAT3P1-201ENST00000471720 806 ntBASIC18■□□□□ 0.47
NUDCD3Q8IVD9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NUDCD3Q8IVD9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 OR6D1P-203ENST00000641209 4860 ntBASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NUDCD3Q8IVD9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 AP000692.2-201ENST00000608391 879 ntBASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NUDCD3Q8IVD9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.97■□□□□ 0.47
NUDCD3Q8IVD9 AC073195.1-201ENST00000607241 877 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms