Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 GPX1P2-201ENST00000429271 606 ntBASIC19.16■□□□□ 0.66
RNF135Q8IUD6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 HNRNPDP1-201ENST00000439535 754 ntBASIC19.16■□□□□ 0.66
RNF135Q8IUD6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 SCARNA2-201ENST00000458748 420 ntBASIC19.16■□□□□ 0.66
RNF135Q8IUD6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 AL356488.2-201ENST00000602755 427 ntBASIC19.16■□□□□ 0.66
RNF135Q8IUD6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 HOXB1-202ENST00000577092 1414 ntBASIC19.16■□□□□ 0.66
RNF135Q8IUD6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF135Q8IUD6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 AC145285.3-201ENST00000564603 959 ntBASIC19.15■□□□□ 0.66
RNF135Q8IUD6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 FAM197Y3-203ENST00000618346 717 ntBASIC19.15■□□□□ 0.66
RNF135Q8IUD6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 AC104109.2-201ENST00000602919 1418 ntBASIC19.15■□□□□ 0.66
RNF135Q8IUD6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.15■□□□□ 0.66
RNF135Q8IUD6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF135Q8IUD6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF135Q8IUD6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF135Q8IUD6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF135Q8IUD6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RNF135Q8IUD6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.14■□□□□ 0.66
RNF135Q8IUD6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RNF135Q8IUD6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 RPS2P28-201ENST00000314255 741 ntBASIC19.14■□□□□ 0.65
RNF135Q8IUD6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 AC112482.1-201ENST00000492080 688 ntBASIC19.14■□□□□ 0.65
RNF135Q8IUD6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 MIR3687-2-201ENST00000577708 61 ntBASIC19.14■□□□□ 0.65
RNF135Q8IUD6 AC024563.2-201ENST00000603282 481 ntBASIC19.14■□□□□ 0.65
RNF135Q8IUD6 MIR3687-1-201ENST00000614492 61 ntBASIC19.14■□□□□ 0.65
RNF135Q8IUD6 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 AL355877.3-201ENST00000622820 899 ntBASIC19.14■□□□□ 0.65
RNF135Q8IUD6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RNF135Q8IUD6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF135Q8IUD6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF135Q8IUD6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF135Q8IUD6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF135Q8IUD6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF135Q8IUD6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms