Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.28■□□□□ 0.68
DCLRE1AQ6PJP8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 AC132938.6-201ENST00000623828 1655 ntBASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 AL662844.1-201ENST00000546340 181 ntBASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 AC011467.2-201ENST00000598425 242 ntBASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
DCLRE1AQ6PJP8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
DCLRE1AQ6PJP8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
DCLRE1AQ6PJP8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
DCLRE1AQ6PJP8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
DCLRE1AQ6PJP8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 INTS4P1-201ENST00000438455 1935 ntBASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 SLC25A6P4-201ENST00000586535 553 ntBASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
DCLRE1AQ6PJP8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 PHGDH-209ENST00000641074 1780 ntBASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.25■□□□□ 0.67
DCLRE1AQ6PJP8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
DCLRE1AQ6PJP8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
DCLRE1AQ6PJP8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms