Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.86■□□□□ 0.61
RFWD3Q6PCD5 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 GPR32P1-201ENST00000601788 811 ntBASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 NPAP1P7-201ENST00000613027 823 ntBASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 AC139713.2-201ENST00000641328 2723 ntBASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.85■□□□□ 0.61
RFWD3Q6PCD5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 AC106820.2-201ENST00000563775 3264 ntBASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 ATP5G2P1-201ENST00000433580 426 ntBASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 AP002383.4-201ENST00000442518 975 ntBASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 KRT18P56-201ENST00000507275 550 ntBASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 LINC01126-201ENST00000623515 1646 ntBASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RFWD3Q6PCD5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RFWD3Q6PCD5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.83■□□□□ 0.6
RFWD3Q6PCD5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms