Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.69□□□□□ -0.22
MRPL54Q6P161 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 GPX1P1-201ENST00000388829 606 ntBASIC13.69□□□□□ -0.22
MRPL54Q6P161 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 TUBB8P6-201ENST00000436895 1288 ntBASIC13.69□□□□□ -0.22
MRPL54Q6P161 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 KRT17P1-201ENST00000399211 1546 ntBASIC13.69□□□□□ -0.22
MRPL54Q6P161 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 CROCCP2-202ENST00000412962 2773 ntBASIC13.68□□□□□ -0.22
MRPL54Q6P161 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 AC068338.2-201ENST00000563278 1430 ntBASIC13.68□□□□□ -0.22
MRPL54Q6P161 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 AC069236.1-201ENST00000604339 616 ntBASIC13.68□□□□□ -0.22
MRPL54Q6P161 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 AC105020.1-201ENST00000435356 2205 ntBASIC13.68□□□□□ -0.22
MRPL54Q6P161 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
MRPL54Q6P161 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
MRPL54Q6P161 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.67□□□□□ -0.22
MRPL54Q6P161 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
MRPL54Q6P161 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms