Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 NFIC-211ENST00000641145 8399 ntBASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 AL162741.1-201ENST00000565563 1558 ntBASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DQA1Q5Y7H0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 LINC01126-201ENST00000623515 1646 ntBASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 AC009113.1-201ENST00000570267 2443 ntBASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DQA1Q5Y7H0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 PCED1CP-201ENST00000419887 785 ntBASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.86■□□□□ 0.29
HLA-DQA1Q5Y7H0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms