Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 ACA64.2-201ENST00000459014 129 ntBASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 AL158211.3-201ENST00000607385 239 ntBASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 SPTSSB-204ENST00000617024 1292 ntBASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PRPF38BQ5VTL8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 SIGLEC16-201ENST00000599858 1437 ntBASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.49■□□□□ 0.71
PRPF38BQ5VTL8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 AP005212.1-201ENST00000581547 1997 ntBASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 MIR658-201ENST00000385210 100 ntBASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 BCYRN1-201ENST00000418539 200 ntBASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 ADH5P3-201ENST00000433842 1137 ntBASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 GIMAP3P-201ENST00000495150 836 ntBASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 PMPCAP1-201ENST00000508114 1576 ntBASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRPF38BQ5VTL8 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 AC004233.3-201ENST00000607794 1269 ntBASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 AL162274.1-201ENST00000617191 1098 ntBASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.47■□□□□ 0.71
PRPF38BQ5VTL8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms