Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 AC126763.1-201ENST00000552015 2118 ntBASIC9.12□□□□□ -0.95
LINC01554Q52M75 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 RALB-208ENST00000631312 311 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 TNRC18P2-201ENST00000417666 2714 ntBASIC9.12□□□□□ -0.95
LINC01554Q52M75 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC9.12□□□□□ -0.95
LINC01554Q52M75 AC116050.2-201ENST00000612102 1779 ntBASIC9.12□□□□□ -0.95
LINC01554Q52M75 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
LINC01554Q52M75 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 AC090164.3-201ENST00000610780 2143 ntBASIC9.11□□□□□ -0.95
LINC01554Q52M75 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 KRT87P-202ENST00000534226 1464 ntBASIC9.11□□□□□ -0.95
LINC01554Q52M75 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 MTURN-203ENST00000409688 843 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
LINC01554Q52M75 SERP1-208ENST00000491660 830 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC9.11□□□□□ -0.95
LINC01554Q52M75 EEF1DP3-203ENST00000566025 782 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms