Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PTPN20Q4JDL3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 AL645929.1-201ENST00000420084 975 ntBASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 AC005332.3-201ENST00000589904 676 ntBASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 GPR32P1-201ENST00000601788 811 ntBASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 AL390719.2-201ENST00000606993 987 ntBASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN20Q4JDL3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 KRT18P55-202ENST00000578578 1546 ntBASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 SLC25A6P5-201ENST00000435663 894 ntBASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 AL353692.3-201ENST00000407031 1396 ntBASIC19.02■□□□□ 0.64
PTPN20Q4JDL3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN20Q4JDL3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 Z83836.1-201ENST00000624605 1642 ntBASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 KRT18P65-201ENST00000439811 1286 ntBASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 AL136038.3-201ENST00000561909 1096 ntBASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN20Q4JDL3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms