Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
LAMA3Q16787 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMA3Q16787 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.43■□□□□ 0.7
LAMA3Q16787 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LAMA3Q16787 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LAMA3Q16787 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LAMA3Q16787 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMA3Q16787 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.43■□□□□ 0.7
LAMA3Q16787 AC105339.1-204ENST00000636249 355 ntBASIC19.43■□□□□ 0.7
LAMA3Q16787 TCF3P1-201ENST00000423021 1937 ntBASIC19.43■□□□□ 0.7
LAMA3Q16787 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.43■□□□□ 0.7
LAMA3Q16787 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 AC006557.2-201ENST00000592985 1240 ntBASIC19.43■□□□□ 0.7
LAMA3Q16787 AC022145.2-201ENST00000598203 171 ntBASIC19.43■□□□□ 0.7
LAMA3Q16787 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAMA3Q16787 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.42■□□□□ 0.7
LAMA3Q16787 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.42■□□□□ 0.7
LAMA3Q16787 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
LAMA3Q16787 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LAMA3Q16787 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LAMA3Q16787 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAMA3Q16787 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.41■□□□□ 0.7
LAMA3Q16787 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA3Q16787 RNA5SP421-201ENST00000516864 134 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA3Q16787 SIGLEC16-201ENST00000599858 1437 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 AL163051.1-201ENST00000569214 1512 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 AC079776.2-201ENST00000641154 1609 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LAMA3Q16787 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LAMA3Q16787 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 IGLL3P-201ENST00000412472 434 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.41■□□□□ 0.7
LAMA3Q16787 DUX4L27-201ENST00000554796 1261 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.41■□□□□ 0.7
LAMA3Q16787 AC008761.3-201ENST00000624803 892 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 Z98044.1-201ENST00000632503 1764 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LAMA3Q16787 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 LINC00602-201ENST00000629776 2065 ntBASIC19.41■□□□□ 0.7
LAMA3Q16787 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA3Q16787 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.41■□□□□ 0.7
LAMA3Q16787 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.41■□□□□ 0.7
LAMA3Q16787 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAMA3Q16787 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.41■□□□□ 0.7
LAMA3Q16787 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LAMA3Q16787 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LAMA3Q16787 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.4■□□□□ 0.7
LAMA3Q16787 AC051619.7-201ENST00000568314 623 ntBASIC19.4■□□□□ 0.7
LAMA3Q16787 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMA3Q16787 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMA3Q16787 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LAMA3Q16787 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMA3Q16787 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 PMS2P4-201ENST00000412466 1052 ntBASIC19.4■□□□□ 0.7
LAMA3Q16787 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
LAMA3Q16787 ACTG1P14-201ENST00000446382 1122 ntBASIC19.4■□□□□ 0.7
LAMA3Q16787 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.4■□□□□ 0.7
LAMA3Q16787 KRT19P2-202ENST00000557173 1012 ntBASIC19.4■□□□□ 0.7
LAMA3Q16787 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.4■□□□□ 0.7
LAMA3Q16787 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LAMA3Q16787 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms