Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBXN1Q04323 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
UBXN1Q04323 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
UBXN1Q04323 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBXN1Q04323 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.83■□□□□ 0.77
UBXN1Q04323 MIR3180-4-201ENST00000582223 153 ntBASIC19.83■□□□□ 0.77
UBXN1Q04323 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.83■□□□□ 0.77
UBXN1Q04323 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.83■□□□□ 0.76
UBXN1Q04323 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.83■□□□□ 0.76
UBXN1Q04323 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
UBXN1Q04323 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
UBXN1Q04323 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
UBXN1Q04323 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBXN1Q04323 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBXN1Q04323 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBXN1Q04323 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBXN1Q04323 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
UBXN1Q04323 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
UBXN1Q04323 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.82■□□□□ 0.76
UBXN1Q04323 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
UBXN1Q04323 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.82■□□□□ 0.76
UBXN1Q04323 TSPY7P-201ENST00000431358 1114 ntBASIC19.82■□□□□ 0.76
UBXN1Q04323 AC007663.1-201ENST00000438948 1240 ntBASIC19.82■□□□□ 0.76
UBXN1Q04323 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.82■□□□□ 0.76
UBXN1Q04323 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.82■□□□□ 0.76
UBXN1Q04323 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.82■□□□□ 0.76
UBXN1Q04323 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
UBXN1Q04323 FITM1-202ENST00000559294 800 ntBASIC19.82■□□□□ 0.76
UBXN1Q04323 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.82■□□□□ 0.76
UBXN1Q04323 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
UBXN1Q04323 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.82■□□□□ 0.76
UBXN1Q04323 AC116562.4-202ENST00000641738 218 ntBASIC19.82■□□□□ 0.76
UBXN1Q04323 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
UBXN1Q04323 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBXN1Q04323 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.81■□□□□ 0.76
UBXN1Q04323 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBXN1Q04323 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
UBXN1Q04323 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
UBXN1Q04323 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.81■□□□□ 0.76
UBXN1Q04323 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.81■□□□□ 0.76
UBXN1Q04323 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.81■□□□□ 0.76
UBXN1Q04323 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.81■□□□□ 0.76
UBXN1Q04323 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.81■□□□□ 0.76
UBXN1Q04323 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
UBXN1Q04323 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
UBXN1Q04323 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.81■□□□□ 0.76
UBXN1Q04323 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.81■□□□□ 0.76
UBXN1Q04323 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBXN1Q04323 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.81■□□□□ 0.76
UBXN1Q04323 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.81■□□□□ 0.76
UBXN1Q04323 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.8■□□□□ 0.76
UBXN1Q04323 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.8■□□□□ 0.76
UBXN1Q04323 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.8■□□□□ 0.76
UBXN1Q04323 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.8■□□□□ 0.76
UBXN1Q04323 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
UBXN1Q04323 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.8■□□□□ 0.76
UBXN1Q04323 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBXN1Q04323 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms