Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.81□□□□□ -0.04
LMO4P61968 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LMO4P61968 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LMO4P61968 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.81□□□□□ -0.04
LMO4P61968 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LMO4P61968 AP000974.1-201ENST00000623909 2387 ntBASIC14.81□□□□□ -0.04
LMO4P61968 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LMO4P61968 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.81□□□□□ -0.04
LMO4P61968 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LMO4P61968 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.8□□□□□ -0.04
LMO4P61968 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 AC096633.1-201ENST00000422446 749 ntBASIC14.8□□□□□ -0.04
LMO4P61968 HNRNPDP1-201ENST00000439535 754 ntBASIC14.8□□□□□ -0.04
LMO4P61968 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 AC093909.1-201ENST00000504731 1122 ntBASIC14.8□□□□□ -0.04
LMO4P61968 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.8□□□□□ -0.04
LMO4P61968 DUTP2-201ENST00000519164 463 ntBASIC14.8□□□□□ -0.04
LMO4P61968 SART3-203ENST00000546611 1184 ntBASIC14.8□□□□□ -0.04
LMO4P61968 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.8□□□□□ -0.04
LMO4P61968 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.8□□□□□ -0.04
LMO4P61968 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.8□□□□□ -0.04
LMO4P61968 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
LMO4P61968 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LMO4P61968 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LMO4P61968 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LMO4P61968 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.8□□□□□ -0.04
LMO4P61968 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LMO4P61968 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO4P61968 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
LMO4P61968 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LMO4P61968 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.79□□□□□ -0.04
LMO4P61968 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO4P61968 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO4P61968 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO4P61968 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
LMO4P61968 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.79□□□□□ -0.04
LMO4P61968 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.79□□□□□ -0.04
LMO4P61968 AC021087.4-201ENST00000563761 564 ntBASIC14.79□□□□□ -0.04
LMO4P61968 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.79□□□□□ -0.04
LMO4P61968 AL049840.3-201ENST00000602669 611 ntBASIC14.79□□□□□ -0.04
LMO4P61968 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.79□□□□□ -0.04
LMO4P61968 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 FAM215A-202ENST00000632077 792 ntBASIC14.79□□□□□ -0.04
LMO4P61968 AF228730.7-201ENST00000641842 219 ntBASIC14.79□□□□□ -0.04
LMO4P61968 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.79□□□□□ -0.04
LMO4P61968 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
LMO4P61968 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LMO4P61968 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.78□□□□□ -0.04
LMO4P61968 AL356309.3-201ENST00000624132 1934 ntBASIC14.78□□□□□ -0.04
LMO4P61968 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LMO4P61968 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LMO4P61968 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LMO4P61968 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms