Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S2P59780 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.56■□□□□ 0.08
AP3S2P59780 AC005837.3-201ENST00000612163 286 ntBASIC15.56■□□□□ 0.08
AP3S2P59780 AC011767.1-201ENST00000617410 1153 ntBASIC15.56■□□□□ 0.08
AP3S2P59780 HLA-A-209ENST00000638375 975 ntBASIC15.56■□□□□ 0.08
AP3S2P59780 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3S2P59780 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
AP3S2P59780 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3S2P59780 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3S2P59780 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S2P59780 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
AP3S2P59780 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
AP3S2P59780 NME6-213ENST00000451657 871 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3S2P59780 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.55■□□□□ 0.08
AP3S2P59780 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.55■□□□□ 0.08
AP3S2P59780 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 AC092437.1-201ENST00000624794 1048 ntBASIC15.55■□□□□ 0.08
AP3S2P59780 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S2P59780 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
AP3S2P59780 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S2P59780 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP3S2P59780 AC133963.1-201ENST00000504166 1679 ntBASIC15.54■□□□□ 0.08
AP3S2P59780 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
AP3S2P59780 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 RCC2P3-201ENST00000418112 1537 ntBASIC15.54■□□□□ 0.08
AP3S2P59780 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP3S2P59780 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 POU5F1P3-201ENST00000428824 1078 ntBASIC15.54■□□□□ 0.08
AP3S2P59780 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.54■□□□□ 0.08
AP3S2P59780 PRSS44-201ENST00000515154 1146 ntBASIC15.54■□□□□ 0.08
AP3S2P59780 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.54■□□□□ 0.08
AP3S2P59780 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
AP3S2P59780 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP3S2P59780 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.54■□□□□ 0.08
AP3S2P59780 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.54■□□□□ 0.08
AP3S2P59780 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms