Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3AP56704 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.3■□□□□ 0.52
WNT3AP56704 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.3■□□□□ 0.52
WNT3AP56704 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
WNT3AP56704 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3AP56704 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
WNT3AP56704 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
WNT3AP56704 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.29■□□□□ 0.52
WNT3AP56704 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
WNT3AP56704 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 HTR7P1-202ENST00000624664 4411 ntBASIC18.29■□□□□ 0.52
WNT3AP56704 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 FAM210CP-201ENST00000445714 574 ntBASIC18.29■□□□□ 0.52
WNT3AP56704 DUTP2-201ENST00000519164 463 ntBASIC18.29■□□□□ 0.52
WNT3AP56704 VENTXP5-201ENST00000523979 775 ntBASIC18.29■□□□□ 0.52
WNT3AP56704 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.29■□□□□ 0.52
WNT3AP56704 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
WNT3AP56704 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.29■□□□□ 0.52
WNT3AP56704 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
WNT3AP56704 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
WNT3AP56704 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.29■□□□□ 0.52
WNT3AP56704 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
WNT3AP56704 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
WNT3AP56704 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
WNT3AP56704 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.28■□□□□ 0.52
WNT3AP56704 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.28■□□□□ 0.52
WNT3AP56704 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.28■□□□□ 0.52
WNT3AP56704 SLC25A6P5-201ENST00000435663 894 ntBASIC18.28■□□□□ 0.52
WNT3AP56704 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.28■□□□□ 0.52
WNT3AP56704 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.28■□□□□ 0.52
WNT3AP56704 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.28■□□□□ 0.52
WNT3AP56704 ZNF444P1-201ENST00000559497 298 ntBASIC18.28■□□□□ 0.52
WNT3AP56704 LINC01238-205ENST00000567549 1107 ntBASIC18.28■□□□□ 0.52
WNT3AP56704 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.28■□□□□ 0.52
WNT3AP56704 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.28■□□□□ 0.52
WNT3AP56704 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.28■□□□□ 0.52
WNT3AP56704 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.28■□□□□ 0.52
WNT3AP56704 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.28■□□□□ 0.52
WNT3AP56704 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
WNT3AP56704 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
WNT3AP56704 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
WNT3AP56704 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
WNT3AP56704 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.27■□□□□ 0.52
WNT3AP56704 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.27■□□□□ 0.52
WNT3AP56704 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.27■□□□□ 0.52
WNT3AP56704 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.27■□□□□ 0.52
WNT3AP56704 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.27■□□□□ 0.52
WNT3AP56704 SPDYE13P-201ENST00000445314 798 ntBASIC18.27■□□□□ 0.52
WNT3AP56704 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.27■□□□□ 0.52
WNT3AP56704 AL671277.2-201ENST00000458060 996 ntBASIC18.27■□□□□ 0.52
WNT3AP56704 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
WNT3AP56704 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.27■□□□□ 0.52
WNT3AP56704 AC083849.1-201ENST00000615227 514 ntBASIC18.27■□□□□ 0.52
WNT3AP56704 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.27■□□□□ 0.52
WNT3AP56704 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
WNT3AP56704 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
WNT3AP56704 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
WNT3AP56704 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms