Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDH15P55291 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH15P55291 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDH15P55291 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.9■□□□□ 0.3
CDH15P55291 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH15P55291 AL596257.1-201ENST00000641463 2694 ntBASIC16.9■□□□□ 0.3
CDH15P55291 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDH15P55291 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.9■□□□□ 0.3
CDH15P55291 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH15P55291 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CDH15P55291 AL096828.2-201ENST00000567259 1965 ntBASIC16.89■□□□□ 0.3
CDH15P55291 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDH15P55291 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH15P55291 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDH15P55291 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH15P55291 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH15P55291 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 TSPY21P-201ENST00000433481 731 ntBASIC16.89■□□□□ 0.29
CDH15P55291 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.89■□□□□ 0.29
CDH15P55291 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CDH15P55291 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 MYC-208ENST00000641036 567 ntBASIC16.89■□□□□ 0.29
CDH15P55291 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.89■□□□□ 0.29
CDH15P55291 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.89■□□□□ 0.29
CDH15P55291 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CDH15P55291 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CDH15P55291 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CDH15P55291 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CDH15P55291 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDH15P55291 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDH15P55291 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH15P55291 AC112777.1-201ENST00000540175 1423 ntBASIC16.88■□□□□ 0.29
CDH15P55291 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CDH15P55291 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH15P55291 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 TSPY23P-201ENST00000440136 739 ntBASIC16.88■□□□□ 0.29
CDH15P55291 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH15P55291 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH15P55291 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH15P55291 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.88■□□□□ 0.29
CDH15P55291 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH15P55291 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH15P55291 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH15P55291 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH15P55291 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CDH15P55291 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH15P55291 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDH15P55291 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH15P55291 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH15P55291 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH15P55291 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH15P55291 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH15P55291 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms