Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDH4P55283 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH4P55283 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH4P55283 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH4P55283 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH4P55283 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
CDH4P55283 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CDH4P55283 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 KRT17P6-201ENST00000453795 1220 ntBASIC18.46■□□□□ 0.55
CDH4P55283 AC104819.1-201ENST00000504587 486 ntBASIC18.46■□□□□ 0.55
CDH4P55283 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH4P55283 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 AP005901.3-202ENST00000581653 237 ntBASIC18.46■□□□□ 0.55
CDH4P55283 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CDH4P55283 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.46■□□□□ 0.55
CDH4P55283 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH4P55283 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CDH4P55283 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.46■□□□□ 0.55
CDH4P55283 REXO1L9P-201ENST00000604264 2108 ntBASIC18.46■□□□□ 0.55
CDH4P55283 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDH4P55283 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDH4P55283 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH4P55283 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH4P55283 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH4P55283 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
CDH4P55283 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDH4P55283 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDH4P55283 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH4P55283 AC091607.1-201ENST00000490318 1060 ntBASIC18.45■□□□□ 0.54
CDH4P55283 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 AC074051.2-201ENST00000565115 352 ntBASIC18.45■□□□□ 0.54
CDH4P55283 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.45■□□□□ 0.54
CDH4P55283 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.45■□□□□ 0.54
CDH4P55283 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CDH4P55283 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CDH4P55283 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH4P55283 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.45■□□□□ 0.54
CDH4P55283 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH4P55283 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CDH4P55283 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH4P55283 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CDH4P55283 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH4P55283 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH4P55283 IGHV3-47-201ENST00000425060 335 ntBASIC18.44■□□□□ 0.54
CDH4P55283 NUS1P1-201ENST00000446295 882 ntBASIC18.44■□□□□ 0.54
CDH4P55283 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH4P55283 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH4P55283 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH4P55283 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.44■□□□□ 0.54
CDH4P55283 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH4P55283 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.44■□□□□ 0.54
CDH4P55283 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH4P55283 CLEC4GP1-201ENST00000596555 870 ntBASIC18.44■□□□□ 0.54
CDH4P55283 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH4P55283 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH4P55283 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH4P55283 ABALON-201ENST00000629058 1903 ntBASIC18.44■□□□□ 0.54
CDH4P55283 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CDH4P55283 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms