Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
NR1H2P55055 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 AP003071.4-201ENST00000562276 1284 ntBASIC17.19■□□□□ 0.34
NR1H2P55055 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.19■□□□□ 0.34
NR1H2P55055 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.19■□□□□ 0.34
NR1H2P55055 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.19■□□□□ 0.34
NR1H2P55055 AL353708.3-201ENST00000610272 989 ntBASIC17.19■□□□□ 0.34
NR1H2P55055 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.19■□□□□ 0.34
NR1H2P55055 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.19■□□□□ 0.34
NR1H2P55055 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.19■□□□□ 0.34
NR1H2P55055 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.19■□□□□ 0.34
NR1H2P55055 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
NR1H2P55055 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NR1H2P55055 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NR1H2P55055 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 AC018553.1-201ENST00000616682 1458 ntBASIC17.18■□□□□ 0.34
NR1H2P55055 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NR1H2P55055 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.18■□□□□ 0.34
NR1H2P55055 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.18■□□□□ 0.34
NR1H2P55055 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
NR1H2P55055 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 TSPY15P-201ENST00000457163 923 ntBASIC17.18■□□□□ 0.34
NR1H2P55055 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.18■□□□□ 0.34
NR1H2P55055 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.18■□□□□ 0.34
NR1H2P55055 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
NR1H2P55055 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.18■□□□□ 0.34
NR1H2P55055 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NR1H2P55055 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
NR1H2P55055 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NR1H2P55055 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.17■□□□□ 0.34
NR1H2P55055 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NR1H2P55055 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NR1H2P55055 AL355075.4-201ENST00000554988 638 ntBASIC17.17■□□□□ 0.34
NR1H2P55055 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.17■□□□□ 0.34
NR1H2P55055 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 AL356309.3-201ENST00000624132 1934 ntBASIC17.17■□□□□ 0.34
NR1H2P55055 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NR1H2P55055 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.17■□□□□ 0.34
NR1H2P55055 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.17■□□□□ 0.34
NR1H2P55055 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.17■□□□□ 0.34
NR1H2P55055 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
NR1H2P55055 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NR1H2P55055 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NR1H2P55055 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.16■□□□□ 0.34
NR1H2P55055 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NR1H2P55055 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.16■□□□□ 0.34
NR1H2P55055 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.16■□□□□ 0.34
NR1H2P55055 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms