Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 LINC00273-201ENST00000539813 1452 ntBASIC12.42□□□□□ -0.42
PCP4P48539 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.42□□□□□ -0.42
PCP4P48539 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
PCP4P48539 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PCP4P48539 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
PCP4P48539 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
PCP4P48539 AL358933.1-201ENST00000565046 2830 ntBASIC12.42□□□□□ -0.42
PCP4P48539 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
PCP4P48539 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC12.42□□□□□ -0.42
PCP4P48539 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
PCP4P48539 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
PCP4P48539 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
PCP4P48539 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PCP4P48539 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.41□□□□□ -0.42
PCP4P48539 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC12.41□□□□□ -0.42
PCP4P48539 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 AC041040.2-201ENST00000622926 2899 ntBASIC12.41□□□□□ -0.42
PCP4P48539 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
PCP4P48539 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 CICP17-201ENST00000418553 2377 ntBASIC12.41□□□□□ -0.42
PCP4P48539 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.41□□□□□ -0.42
PCP4P48539 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
PCP4P48539 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.41□□□□□ -0.42
PCP4P48539 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
PCP4P48539 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
PCP4P48539 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 OR2I1P-209ENST00000641730 5365 ntBASIC12.4□□□□□ -0.42
PCP4P48539 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.4□□□□□ -0.42
PCP4P48539 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.4□□□□□ -0.42
PCP4P48539 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
PCP4P48539 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.4□□□□□ -0.42
PCP4P48539 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 STK25-204ENST00000405585 1643 ntTSL 2 BASIC12.4□□□□□ -0.42
PCP4P48539 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
PCP4P48539 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
PCP4P48539 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
PCP4P48539 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
PCP4P48539 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 AC006449.5-201ENST00000610658 2098 ntBASIC12.39□□□□□ -0.43
PCP4P48539 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms