Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A12P48065 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC6A12P48065 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A12P48065 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC6A12P48065 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
SLC6A12P48065 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.46■□□□□ 0.39
SLC6A12P48065 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A12P48065 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A12P48065 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A12P48065 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC6A12P48065 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.46■□□□□ 0.38
SLC6A12P48065 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SLC6A12P48065 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.46■□□□□ 0.38
SLC6A12P48065 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A12P48065 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A12P48065 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A12P48065 LETM1P2-201ENST00000597330 2178 ntBASIC17.45■□□□□ 0.38
SLC6A12P48065 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A12P48065 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 IGHGP-201ENST00000390555 1178 ntBASIC17.45■□□□□ 0.38
SLC6A12P48065 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A12P48065 SPDYE13P-201ENST00000445314 798 ntBASIC17.45■□□□□ 0.38
SLC6A12P48065 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A12P48065 AC092647.4-201ENST00000457211 535 ntBASIC17.45■□□□□ 0.38
SLC6A12P48065 VENTXP5-201ENST00000523979 775 ntBASIC17.45■□□□□ 0.38
SLC6A12P48065 AC022616.7-201ENST00000525383 220 ntBASIC17.45■□□□□ 0.38
SLC6A12P48065 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A12P48065 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A12P48065 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A12P48065 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC6A12P48065 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A12P48065 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A12P48065 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SLC6A12P48065 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A12P48065 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A12P48065 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SLC6A12P48065 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC6A12P48065 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC6A12P48065 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A12P48065 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.44■□□□□ 0.38
SLC6A12P48065 DUX4L26-201ENST00000489078 1255 ntBASIC17.44■□□□□ 0.38
SLC6A12P48065 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
SLC6A12P48065 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A12P48065 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A12P48065 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A12P48065 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A12P48065 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.44■□□□□ 0.38
SLC6A12P48065 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SLC6A12P48065 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 AC026471.1-201ENST00000564629 3026 ntBASIC17.44■□□□□ 0.38
SLC6A12P48065 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC6A12P48065 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms