Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
NKX2-1P43699 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX2-1P43699 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX2-1P43699 LINC00602-201ENST00000629776 2065 ntBASIC14.85□□□□□ -0.03
NKX2-1P43699 AL121761.2-201ENST00000598007 1648 ntBASIC14.84□□□□□ -0.03
NKX2-1P43699 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-1P43699 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NKX2-1P43699 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX2-1P43699 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-1P43699 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-1P43699 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.84□□□□□ -0.03
NKX2-1P43699 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-1P43699 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.84□□□□□ -0.03
NKX2-1P43699 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-1P43699 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX2-1P43699 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX2-1P43699 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX2-1P43699 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
NKX2-1P43699 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-1P43699 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-1P43699 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-1P43699 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NKX2-1P43699 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NKX2-1P43699 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-1P43699 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX2-1P43699 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-1P43699 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX2-1P43699 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-1P43699 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX2-1P43699 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-1P43699 AL138781.1-201ENST00000566567 1274 ntBASIC14.83□□□□□ -0.04
NKX2-1P43699 AC133041.1-202ENST00000642053 222 ntBASIC14.83□□□□□ -0.04
NKX2-1P43699 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-1P43699 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-1P43699 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-1P43699 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-1P43699 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NKX2-1P43699 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NKX2-1P43699 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX2-1P43699 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX2-1P43699 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX2-1P43699 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NKX2-1P43699 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX2-1P43699 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX2-1P43699 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms