Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.55■□□□□ 0.72
TNFSF9P41273 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF9P41273 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF9P41273 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TNFSF9P41273 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TNFSF9P41273 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TNFSF9P41273 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
TNFSF9P41273 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.54■□□□□ 0.72
TNFSF9P41273 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 IGHV3-47-201ENST00000425060 335 ntBASIC19.54■□□□□ 0.72
TNFSF9P41273 KRT17P6-201ENST00000453795 1220 ntBASIC19.54■□□□□ 0.72
TNFSF9P41273 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.54■□□□□ 0.72
TNFSF9P41273 AC112698.1-201ENST00000510299 916 ntBASIC19.54■□□□□ 0.72
TNFSF9P41273 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 AC012615.1-201ENST00000565797 1299 ntBASIC19.54■□□□□ 0.72
TNFSF9P41273 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
TNFSF9P41273 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TNFSF9P41273 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.54■□□□□ 0.72
TNFSF9P41273 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TNFSF9P41273 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.54■□□□□ 0.72
TNFSF9P41273 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TNFSF9P41273 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.54■□□□□ 0.72
TNFSF9P41273 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TNFSF9P41273 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TNFSF9P41273 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.53■□□□□ 0.72
TNFSF9P41273 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TNFSF9P41273 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.53■□□□□ 0.72
TNFSF9P41273 AC104819.1-201ENST00000504587 486 ntBASIC19.53■□□□□ 0.72
TNFSF9P41273 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFSF9P41273 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.53■□□□□ 0.72
TNFSF9P41273 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFSF9P41273 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.53■□□□□ 0.72
TNFSF9P41273 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.53■□□□□ 0.72
TNFSF9P41273 Z69720.1-201ENST00000601483 472 ntBASIC19.53■□□□□ 0.72
TNFSF9P41273 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 AC135050.7-201ENST00000624508 2218 ntBASIC19.53■□□□□ 0.72
TNFSF9P41273 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TNFSF9P41273 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TNFSF9P41273 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TNFSF9P41273 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.53■□□□□ 0.72
TNFSF9P41273 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.53■□□□□ 0.72
TNFSF9P41273 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.52■□□□□ 0.72
TNFSF9P41273 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 AL354751.1-201ENST00000412768 1863 ntBASIC19.52■□□□□ 0.72
TNFSF9P41273 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TNFSF9P41273 NSUN5P1-202ENST00000421140 1535 ntBASIC19.52■□□□□ 0.72
TNFSF9P41273 NSUN5P2-203ENST00000457352 1529 ntBASIC19.52■□□□□ 0.72
TNFSF9P41273 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.52■□□□□ 0.72
TNFSF9P41273 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TNFSF9P41273 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms