Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 AC007613.1-201ENST00000572811 2597 ntBASIC16.56■□□□□ 0.24
RFC3P40938 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RFC3P40938 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RFC3P40938 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RFC3P40938 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RFC3P40938 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.56■□□□□ 0.24
RFC3P40938 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC3P40938 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFC3P40938 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 KRT89P-201ENST00000620027 1478 ntBASIC16.55■□□□□ 0.24
RFC3P40938 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RFC3P40938 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 AC004870.1-201ENST00000315132 882 ntBASIC16.55■□□□□ 0.24
RFC3P40938 TSPY19P-201ENST00000418461 509 ntBASIC16.55■□□□□ 0.24
RFC3P40938 TSPY18P-201ENST00000441642 509 ntBASIC16.55■□□□□ 0.24
RFC3P40938 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.55■□□□□ 0.24
RFC3P40938 KRT18P31-201ENST00000506277 1292 ntBASIC16.55■□□□□ 0.24
RFC3P40938 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.55■□□□□ 0.24
RFC3P40938 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFC3P40938 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 AL121772.3-201ENST00000610840 674 ntBASIC16.55■□□□□ 0.24
RFC3P40938 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFC3P40938 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RFC3P40938 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFC3P40938 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RFC3P40938 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RFC3P40938 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RFC3P40938 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 AC126763.1-201ENST00000552015 2118 ntBASIC16.54■□□□□ 0.24
RFC3P40938 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.54■□□□□ 0.24
RFC3P40938 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RFC3P40938 NUS1P2-201ENST00000417358 873 ntBASIC16.54■□□□□ 0.24
RFC3P40938 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.54■□□□□ 0.24
RFC3P40938 AC011840.4-201ENST00000578471 627 ntBASIC16.54■□□□□ 0.24
RFC3P40938 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.54■□□□□ 0.24
RFC3P40938 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFC3P40938 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RFC3P40938 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RFC3P40938 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 NSUN5P1-202ENST00000421140 1535 ntBASIC16.54■□□□□ 0.24
RFC3P40938 NSUN5P2-203ENST00000457352 1529 ntBASIC16.54■□□□□ 0.24
RFC3P40938 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFC3P40938 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC3P40938 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.53■□□□□ 0.24
RFC3P40938 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RFC3P40938 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 LINC01126-201ENST00000623515 1646 ntBASIC16.53■□□□□ 0.24
RFC3P40938 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFC3P40938 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms