Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 SIRPAP1-201ENST00000448467 1770 ntBASIC19.81■□□□□ 0.76
KRT9P35527 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 MIR149-201ENST00000384879 89 ntBASIC19.81■□□□□ 0.76
KRT9P35527 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT9P35527 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 AC007663.1-201ENST00000438948 1240 ntBASIC19.81■□□□□ 0.76
KRT9P35527 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT9P35527 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 PP12613-201ENST00000424958 2230 ntBASIC19.81■□□□□ 0.76
KRT9P35527 KRT8P9-201ENST00000558927 1449 ntBASIC19.81■□□□□ 0.76
KRT9P35527 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT9P35527 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.81■□□□□ 0.76
KRT9P35527 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 PRORSD1P-202ENST00000563365 2154 ntBASIC19.81■□□□□ 0.76
KRT9P35527 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
KRT9P35527 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
KRT9P35527 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
KRT9P35527 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT9P35527 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT9P35527 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
KRT9P35527 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
KRT9P35527 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT9P35527 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT9P35527 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
KRT9P35527 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT9P35527 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
KRT9P35527 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT9P35527 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT9P35527 AC128688.1-201ENST00000487626 519 ntBASIC19.8■□□□□ 0.76
KRT9P35527 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.8■□□□□ 0.76
KRT9P35527 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
KRT9P35527 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT9P35527 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KRT9P35527 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.8■□□□□ 0.76
KRT9P35527 AC093010.1-201ENST00000473625 1624 ntBASIC19.8■□□□□ 0.76
KRT9P35527 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KRT9P35527 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT9P35527 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 AC108860.2-201ENST00000562760 2183 ntBASIC19.79■□□□□ 0.76
KRT9P35527 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
KRT9P35527 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT9P35527 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT9P35527 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT9P35527 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.79■□□□□ 0.76
KRT9P35527 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT9P35527 AC010653.2-201ENST00000623505 997 ntBASIC19.79■□□□□ 0.76
KRT9P35527 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT9P35527 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT9P35527 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT9P35527 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KRT9P35527 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
KRT9P35527 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KRT9P35527 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 KRT18P55-202ENST00000578578 1546 ntBASIC19.78■□□□□ 0.76
KRT9P35527 OR6D1P-202ENST00000641007 5290 ntBASIC19.78■□□□□ 0.76
KRT9P35527 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT9P35527 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
KRT9P35527 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KRT9P35527 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT9P35527 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.78■□□□□ 0.76
KRT9P35527 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
KRT9P35527 AC010947.1-201ENST00000623454 693 ntBASIC19.78■□□□□ 0.76
KRT9P35527 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT9P35527 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT9P35527 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT9P35527 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KRT9P35527 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms