Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HOXD11P31277 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 RGN-201ENST00000336169 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
HOXD11P31277 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 ANKRD7-201ENST00000265224 1298 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 HBZP1-201ENST00000354915 429 ntBASIC19.35■□□□□ 0.69
HOXD11P31277 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 NIF3L1-206ENST00000416651 967 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXD11P31277 AC002127.1-201ENST00000421305 225 ntBASIC19.35■□□□□ 0.69
HOXD11P31277 BMP6P1-201ENST00000431230 679 ntBASIC19.35■□□□□ 0.69
HOXD11P31277 Z84478.1-201ENST00000438230 1219 ntBASIC19.35■□□□□ 0.69
HOXD11P31277 AC004967.1-201ENST00000453589 447 ntBASIC19.35■□□□□ 0.69
HOXD11P31277 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC19.35■□□□□ 0.69
HOXD11P31277 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXD11P31277 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXD11P31277 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC19.35■□□□□ 0.69
HOXD11P31277 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXD11P31277 AC010608.3-201ENST00000625048 527 ntBASIC19.35■□□□□ 0.69
HOXD11P31277 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.35■□□□□ 0.69
HOXD11P31277 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HOXD11P31277 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 BRD7P6-201ENST00000431406 1860 ntBASIC19.35■□□□□ 0.69
HOXD11P31277 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.35■□□□□ 0.69
HOXD11P31277 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.35■□□□□ 0.69
HOXD11P31277 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXD11P31277 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXD11P31277 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 AC007952.6-201ENST00000573168 2673 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 AC003957.1-201ENST00000625108 2673 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXD11P31277 ARL14-201ENST00000320767 1294 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HOXD11P31277 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXD11P31277 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXD11P31277 AC019294.1-201ENST00000395215 1184 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXD11P31277 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXD11P31277 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXD11P31277 SPDYE15P-201ENST00000424157 909 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.34■□□□□ 0.69
HOXD11P31277 AL117382.1-201ENST00000438702 754 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXD11P31277 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXD11P31277 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXD11P31277 SMIM19-205ENST00000490331 487 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
HOXD11P31277 RN7SKP52-201ENST00000516219 250 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 AC023632.3-201ENST00000521633 145 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXD11P31277 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
HOXD11P31277 AL442163.2-201ENST00000553912 710 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 AL391152.1-201ENST00000554160 1111 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXD11P31277 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.34■□□□□ 0.69
HOXD11P31277 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HOXD11P31277 AL358072.1-201ENST00000604156 575 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 AC098935.2-201ENST00000604222 466 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 AL356652.1-201ENST00000615962 565 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXD11P31277 AC051619.9-201ENST00000623237 597 ntBASIC19.34■□□□□ 0.69
HOXD11P31277 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXD11P31277 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXD11P31277 AC027313.1-201ENST00000509159 1666 ntBASIC19.33■□□□□ 0.69
HOXD11P31277 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HOXD11P31277 TRIM64FP-201ENST00000427305 1371 ntBASIC19.33■□□□□ 0.69
HOXD11P31277 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.33■□□□□ 0.69
HOXD11P31277 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXD11P31277 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXD11P31277 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXD11P31277 Y_RNA.599-201ENST00000410489 109 ntBASIC19.33■□□□□ 0.68
HOXD11P31277 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXD11P31277 LSMEM1-202ENST00000439068 730 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HOXD11P31277 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXD11P31277 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC19.33■□□□□ 0.68
HOXD11P31277 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
HOXD11P31277 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXD11P31277 RFPL4AP1-201ENST00000530883 850 ntBASIC19.33■□□□□ 0.68
HOXD11P31277 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXD11P31277 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXD11P31277 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms