Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.47■□□□□ 0.55
PTPN3P26045 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PTPN3P26045 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PTPN3P26045 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
PTPN3P26045 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 KRT18P55-202ENST00000578578 1546 ntBASIC18.46■□□□□ 0.55
PTPN3P26045 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN3P26045 AC113404.2-201ENST00000507884 177 ntBASIC18.46■□□□□ 0.55
PTPN3P26045 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.46■□□□□ 0.55
PTPN3P26045 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN3P26045 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PTPN3P26045 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 LINC00602-201ENST00000629776 2065 ntBASIC18.46■□□□□ 0.55
PTPN3P26045 AC134043.2-201ENST00000624206 2238 ntBASIC18.46■□□□□ 0.55
PTPN3P26045 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
PTPN3P26045 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.46■□□□□ 0.55
PTPN3P26045 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PTPN3P26045 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.46■□□□□ 0.54
PTPN3P26045 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PTPN3P26045 KRT89P-201ENST00000620027 1478 ntBASIC18.46■□□□□ 0.54
PTPN3P26045 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN3P26045 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
PTPN3P26045 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PTPN3P26045 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PTPN3P26045 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN3P26045 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN3P26045 HOMER2P1-201ENST00000455653 964 ntBASIC18.45■□□□□ 0.54
PTPN3P26045 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN3P26045 AL359075.1-203ENST00000462729 1002 ntBASIC18.45■□□□□ 0.54
PTPN3P26045 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN3P26045 RN7SL850P-201ENST00000579959 291 ntBASIC18.45■□□□□ 0.54
PTPN3P26045 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PTPN3P26045 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.45■□□□□ 0.54
PTPN3P26045 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
PTPN3P26045 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.45■□□□□ 0.54
PTPN3P26045 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PTPN3P26045 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN3P26045 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN3P26045 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 PCDHB18P-201ENST00000524813 2368 ntBASIC18.44■□□□□ 0.54
PTPN3P26045 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.44■□□□□ 0.54
PTPN3P26045 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN3P26045 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN3P26045 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN3P26045 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN3P26045 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN3P26045 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN3P26045 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.44■□□□□ 0.54
PTPN3P26045 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.44■□□□□ 0.54
PTPN3P26045 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.44■□□□□ 0.54
PTPN3P26045 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PTPN3P26045 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN3P26045 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms