Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.27■□□□□ 0.04
COL8A2P25067 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.27■□□□□ 0.04
COL8A2P25067 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.27■□□□□ 0.04
COL8A2P25067 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.27■□□□□ 0.04
COL8A2P25067 AC068472.1-201ENST00000474589 881 ntBASIC15.27■□□□□ 0.04
COL8A2P25067 VENTXP7-201ENST00000475503 772 ntBASIC15.27■□□□□ 0.04
COL8A2P25067 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.27■□□□□ 0.04
COL8A2P25067 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.27■□□□□ 0.04
COL8A2P25067 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.27■□□□□ 0.04
COL8A2P25067 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.27■□□□□ 0.04
COL8A2P25067 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
COL8A2P25067 AC138894.3-201ENST00000603787 634 ntBASIC15.27■□□□□ 0.04
COL8A2P25067 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL8A2P25067 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.27■□□□□ 0.03
COL8A2P25067 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL8A2P25067 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL8A2P25067 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.27■□□□□ 0.03
COL8A2P25067 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.27■□□□□ 0.03
COL8A2P25067 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
COL8A2P25067 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.27■□□□□ 0.03
COL8A2P25067 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
COL8A2P25067 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
COL8A2P25067 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
COL8A2P25067 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
COL8A2P25067 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
COL8A2P25067 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
COL8A2P25067 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.26■□□□□ 0.03
COL8A2P25067 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.26■□□□□ 0.03
COL8A2P25067 AC026396.1-201ENST00000419388 421 ntBASIC15.26■□□□□ 0.03
COL8A2P25067 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.26■□□□□ 0.03
COL8A2P25067 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.26■□□□□ 0.03
COL8A2P25067 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.26■□□□□ 0.03
COL8A2P25067 KRT18P31-201ENST00000506277 1292 ntBASIC15.26■□□□□ 0.03
COL8A2P25067 AC111152.3-201ENST00000569699 673 ntBASIC15.26■□□□□ 0.03
COL8A2P25067 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
COL8A2P25067 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 NSUN5P1-202ENST00000421140 1535 ntBASIC15.26■□□□□ 0.03
COL8A2P25067 NSUN5P2-203ENST00000457352 1529 ntBASIC15.26■□□□□ 0.03
COL8A2P25067 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.26■□□□□ 0.03
COL8A2P25067 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
COL8A2P25067 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
COL8A2P25067 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
COL8A2P25067 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.25■□□□□ 0.03
COL8A2P25067 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 GMCL1P1-201ENST00000463439 1581 ntBASIC15.25■□□□□ 0.03
COL8A2P25067 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 MINOS1P3-201ENST00000457048 203 ntBASIC15.25■□□□□ 0.03
COL8A2P25067 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 EMBP1-201ENST00000458200 901 ntBASIC15.25■□□□□ 0.03
COL8A2P25067 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.25■□□□□ 0.03
COL8A2P25067 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.25■□□□□ 0.03
COL8A2P25067 IFNL4P1-201ENST00000607083 540 ntBASIC15.25■□□□□ 0.03
COL8A2P25067 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
COL8A2P25067 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.25■□□□□ 0.03
COL8A2P25067 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.25■□□□□ 0.03
COL8A2P25067 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
COL8A2P25067 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
COL8A2P25067 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
COL8A2P25067 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms