Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.04■□□□□ 0.64
MMP8P22894 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP8P22894 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.04■□□□□ 0.64
MMP8P22894 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP8P22894 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP8P22894 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MMP8P22894 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP8P22894 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MMP8P22894 AC012317.2-201ENST00000623305 2251 ntBASIC19.03■□□□□ 0.64
MMP8P22894 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MMP8P22894 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.03■□□□□ 0.64
MMP8P22894 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 TMPOP1-202ENST00000424642 1267 ntBASIC19.03■□□□□ 0.64
MMP8P22894 KRT18P65-201ENST00000439811 1286 ntBASIC19.03■□□□□ 0.64
MMP8P22894 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP8P22894 AC022616.7-201ENST00000525383 220 ntBASIC19.03■□□□□ 0.64
MMP8P22894 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.03■□□□□ 0.64
MMP8P22894 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP8P22894 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
MMP8P22894 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MMP8P22894 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP8P22894 AC004263.2-201ENST00000617183 678 ntBASIC19.03■□□□□ 0.64
MMP8P22894 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.03■□□□□ 0.64
MMP8P22894 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.03■□□□□ 0.64
MMP8P22894 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.03■□□□□ 0.64
MMP8P22894 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MMP8P22894 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.02■□□□□ 0.64
MMP8P22894 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 AC022898.2-201ENST00000616822 1312 ntBASIC19.02■□□□□ 0.64
MMP8P22894 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.02■□□□□ 0.64
MMP8P22894 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MMP8P22894 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MMP8P22894 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 IGHGP-201ENST00000390555 1178 ntBASIC19.02■□□□□ 0.64
MMP8P22894 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.02■□□□□ 0.64
MMP8P22894 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.02■□□□□ 0.64
MMP8P22894 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.02■□□□□ 0.64
MMP8P22894 SPDYE13P-201ENST00000445314 798 ntBASIC19.02■□□□□ 0.64
MMP8P22894 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.02■□□□□ 0.64
MMP8P22894 VENTXP5-201ENST00000523979 775 ntBASIC19.02■□□□□ 0.64
MMP8P22894 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.02■□□□□ 0.64
MMP8P22894 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.02■□□□□ 0.64
MMP8P22894 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.02■□□□□ 0.64
MMP8P22894 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MMP8P22894 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.02■□□□□ 0.64
MMP8P22894 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MMP8P22894 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.02■□□□□ 0.63
MMP8P22894 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.02■□□□□ 0.63
MMP8P22894 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
MMP8P22894 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 LINC01311-201ENST00000565162 1445 ntBASIC19.01■□□□□ 0.63
MMP8P22894 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.01■□□□□ 0.63
MMP8P22894 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.01■□□□□ 0.63
MMP8P22894 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.01■□□□□ 0.63
MMP8P22894 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.01■□□□□ 0.63
MMP8P22894 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms