Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RAB3BP20337 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RAB3BP20337 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB3BP20337 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB3BP20337 KRT8P50-201ENST00000562022 1438 ntBASIC15.88■□□□□ 0.13
RAB3BP20337 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB3BP20337 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RAB3BP20337 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RAB3BP20337 AC093010.1-201ENST00000473625 1624 ntBASIC15.88■□□□□ 0.13
RAB3BP20337 AL355312.1-201ENST00000407115 2176 ntBASIC15.88■□□□□ 0.13
RAB3BP20337 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.88■□□□□ 0.13
RAB3BP20337 AC091390.4-202ENST00000476426 537 ntBASIC15.88■□□□□ 0.13
RAB3BP20337 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB3BP20337 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB3BP20337 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RAB3BP20337 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RAB3BP20337 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB3BP20337 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3BP20337 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB3BP20337 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 AC034236.2-201ENST00000606662 1610 ntBASIC15.87■□□□□ 0.13
RAB3BP20337 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RAB3BP20337 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB3BP20337 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB3BP20337 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.87■□□□□ 0.13
RAB3BP20337 AC004980.1-204ENST00000429707 299 ntBASIC15.87■□□□□ 0.13
RAB3BP20337 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RAB3BP20337 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB3BP20337 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.87■□□□□ 0.13
RAB3BP20337 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.87■□□□□ 0.13
RAB3BP20337 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.87■□□□□ 0.13
RAB3BP20337 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.87■□□□□ 0.13
RAB3BP20337 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.87■□□□□ 0.13
RAB3BP20337 AL138688.1-201ENST00000624851 1594 ntBASIC15.87■□□□□ 0.13
RAB3BP20337 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.87■□□□□ 0.13
RAB3BP20337 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RAB3BP20337 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB3BP20337 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RAB3BP20337 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RAB3BP20337 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 AC099343.3-201ENST00000605834 2503 ntBASIC15.86■□□□□ 0.13
RAB3BP20337 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RAB3BP20337 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.86■□□□□ 0.13
RAB3BP20337 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 CKBP1-201ENST00000565489 1086 ntBASIC15.86■□□□□ 0.13
RAB3BP20337 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.86■□□□□ 0.13
RAB3BP20337 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.86■□□□□ 0.13
RAB3BP20337 MIR5787-201ENST00000611784 55 ntBASIC15.86■□□□□ 0.13
RAB3BP20337 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms