Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 AL024508.2-201ENST00000607749 1894 ntBASIC16.83■□□□□ 0.28
TNFRSF1BP20333 AL023803.3-201ENST00000615559 522 ntBASIC16.83■□□□□ 0.28
TNFRSF1BP20333 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TNFRSF1BP20333 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 KRT18P55-202ENST00000578578 1546 ntBASIC16.82■□□□□ 0.28
TNFRSF1BP20333 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 AC012618.2-201ENST00000428058 849 ntBASIC16.82■□□□□ 0.28
TNFRSF1BP20333 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.82■□□□□ 0.28
TNFRSF1BP20333 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TNFRSF1BP20333 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.81■□□□□ 0.28
TNFRSF1BP20333 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 AL390955.1-201ENST00000428694 934 ntBASIC16.81■□□□□ 0.28
TNFRSF1BP20333 UBE2SP1-201ENST00000450587 669 ntBASIC16.81■□□□□ 0.28
TNFRSF1BP20333 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 AP003071.4-201ENST00000562276 1284 ntBASIC16.81■□□□□ 0.28
TNFRSF1BP20333 AP005242.2-201ENST00000580065 1175 ntBASIC16.81■□□□□ 0.28
TNFRSF1BP20333 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 Z99916.2-201ENST00000604037 246 ntBASIC16.81■□□□□ 0.28
TNFRSF1BP20333 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TNFRSF1BP20333 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 AC100803.2-201ENST00000562459 1963 ntBASIC16.8■□□□□ 0.28
TNFRSF1BP20333 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 AL355312.1-201ENST00000407115 2176 ntBASIC16.8■□□□□ 0.28
TNFRSF1BP20333 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.8■□□□□ 0.28
TNFRSF1BP20333 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms