Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.91■□□□□ 0.94
ERCC3P19447 CROCCP3-202ENST00000420820 1947 ntBASIC20.91■□□□□ 0.94
ERCC3P19447 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC3P19447 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ERCC3P19447 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ERCC3P19447 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
ERCC3P19447 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC3P19447 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.91■□□□□ 0.94
ERCC3P19447 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC3P19447 AP001005.1-201ENST00000571755 1248 ntBASIC20.91■□□□□ 0.94
ERCC3P19447 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.91■□□□□ 0.94
ERCC3P19447 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.91■□□□□ 0.94
ERCC3P19447 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.91■□□□□ 0.94
ERCC3P19447 GPALPP1-207ENST00000611650 899 ntBASIC20.91■□□□□ 0.94
ERCC3P19447 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.91■□□□□ 0.94
ERCC3P19447 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.91■□□□□ 0.94
ERCC3P19447 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC3P19447 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC3P19447 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC3P19447 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ERCC3P19447 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ERCC3P19447 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC3P19447 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC3P19447 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
ERCC3P19447 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ERCC3P19447 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.9■□□□□ 0.94
ERCC3P19447 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ERCC3P19447 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.9■□□□□ 0.94
ERCC3P19447 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC3P19447 AC006538.3-201ENST00000612495 578 ntBASIC20.9■□□□□ 0.94
ERCC3P19447 AL773604.1-201ENST00000617417 272 ntBASIC20.9■□□□□ 0.94
ERCC3P19447 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ERCC3P19447 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC3P19447 NEFHP1-201ENST00000412845 2629 ntBASIC20.9■□□□□ 0.94
ERCC3P19447 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.9■□□□□ 0.94
ERCC3P19447 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ERCC3P19447 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ERCC3P19447 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.94
ERCC3P19447 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC3P19447 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
ERCC3P19447 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC3P19447 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC3P19447 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ERCC3P19447 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ERCC3P19447 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.89■□□□□ 0.93
ERCC3P19447 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
ERCC3P19447 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 AC132008.2-207ENST00000454517 770 ntBASIC20.89■□□□□ 0.93
ERCC3P19447 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.89■□□□□ 0.93
ERCC3P19447 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.89■□□□□ 0.93
ERCC3P19447 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ERCC3P19447 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.88■□□□□ 0.93
ERCC3P19447 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ERCC3P19447 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
ERCC3P19447 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 IL9RP2-201ENST00000423948 1312 ntBASIC20.88■□□□□ 0.93
ERCC3P19447 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
ERCC3P19447 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC3P19447 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ERCC3P19447 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.88■□□□□ 0.93
ERCC3P19447 AC005336.2-201ENST00000593183 939 ntBASIC20.88■□□□□ 0.93
ERCC3P19447 AC008687.5-201ENST00000593746 558 ntBASIC20.88■□□□□ 0.93
ERCC3P19447 AC148477.8-201ENST00000624298 468 ntBASIC20.88■□□□□ 0.93
ERCC3P19447 AF228730.7-201ENST00000641842 219 ntBASIC20.88■□□□□ 0.93
ERCC3P19447 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.88■□□□□ 0.93
ERCC3P19447 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 SDHAP2-201ENST00000455183 2001 ntBASIC20.88■□□□□ 0.93
ERCC3P19447 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ERCC3P19447 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ERCC3P19447 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ERCC3P19447 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ERCC3P19447 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
ERCC3P19447 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms