Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.54■■□□□ 1.04
NCLP19338 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.54■■□□□ 1.04
NCLP19338 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 REXO1L9P-201ENST00000604264 2108 ntBASIC21.54■■□□□ 1.04
NCLP19338 REXO1L12P-201ENST00000622156 912 ntBASIC21.54■■□□□ 1.04
NCLP19338 AC131212.4-201ENST00000623606 975 ntBASIC21.54■■□□□ 1.04
NCLP19338 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NCLP19338 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
NCLP19338 AC138028.4-201ENST00000564984 1845 ntBASIC21.54■■□□□ 1.04
NCLP19338 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.54■■□□□ 1.04
NCLP19338 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NCLP19338 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.54■■□□□ 1.04
NCLP19338 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.53■■□□□ 1.04
NCLP19338 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
NCLP19338 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.53■■□□□ 1.04
NCLP19338 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.53■■□□□ 1.04
NCLP19338 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.53■■□□□ 1.04
NCLP19338 SLC25A6P5-201ENST00000435663 894 ntBASIC21.53■■□□□ 1.04
NCLP19338 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.53■■□□□ 1.04
NCLP19338 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.53■■□□□ 1.04
NCLP19338 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.53■■□□□ 1.04
NCLP19338 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.53■■□□□ 1.04
NCLP19338 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NCLP19338 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.53■■□□□ 1.04
NCLP19338 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC21.53■■□□□ 1.04
NCLP19338 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC21.52■■□□□ 1.04
NCLP19338 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC21.52■■□□□ 1.04
NCLP19338 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
NCLP19338 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
NCLP19338 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC21.52■■□□□ 1.04
NCLP19338 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.52■■□□□ 1.04
NCLP19338 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.52■■□□□ 1.04
NCLP19338 PRSS44-201ENST00000515154 1146 ntBASIC21.52■■□□□ 1.04
NCLP19338 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.52■■□□□ 1.04
NCLP19338 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.52■■□□□ 1.04
NCLP19338 CD177P1-201ENST00000606252 935 ntBASIC21.52■■□□□ 1.04
NCLP19338 AC073195.1-201ENST00000607241 877 ntBASIC21.52■■□□□ 1.04
NCLP19338 AL353708.3-201ENST00000610272 989 ntBASIC21.52■■□□□ 1.04
NCLP19338 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.52■■□□□ 1.04
NCLP19338 AC026471.5-201ENST00000615068 467 ntBASIC21.52■■□□□ 1.04
NCLP19338 AC080080.1-201ENST00000625121 2420 ntBASIC21.52■■□□□ 1.04
NCLP19338 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.52■■□□□ 1.04
NCLP19338 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 KRT8P3-201ENST00000519669 1449 ntBASIC21.52■■□□□ 1.04
NCLP19338 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NCLP19338 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
NCLP19338 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
NCLP19338 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC21.52■■□□□ 1.03
NCLP19338 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NCLP19338 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.52■■□□□ 1.03
NCLP19338 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NCLP19338 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
NCLP19338 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
NCLP19338 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
NCLP19338 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NCLP19338 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NCLP19338 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.51■■□□□ 1.03
NCLP19338 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms