Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.88■□□□□ 0.61
TCF4P15884 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
TCF4P15884 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.88■□□□□ 0.61
TCF4P15884 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.88■□□□□ 0.61
TCF4P15884 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TCF4P15884 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TCF4P15884 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TCF4P15884 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
TCF4P15884 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TCF4P15884 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TCF4P15884 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TCF4P15884 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.87■□□□□ 0.61
TCF4P15884 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TCF4P15884 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.87■□□□□ 0.61
TCF4P15884 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.87■□□□□ 0.61
TCF4P15884 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.87■□□□□ 0.61
TCF4P15884 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.87■□□□□ 0.61
TCF4P15884 KRT18P55-202ENST00000578578 1546 ntBASIC18.87■□□□□ 0.61
TCF4P15884 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.87■□□□□ 0.61
TCF4P15884 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TCF4P15884 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TCF4P15884 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TCF4P15884 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.87■□□□□ 0.61
TCF4P15884 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TCF4P15884 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.86■□□□□ 0.61
TCF4P15884 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.86■□□□□ 0.61
TCF4P15884 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.86■□□□□ 0.61
TCF4P15884 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.86■□□□□ 0.61
TCF4P15884 BX664615.1-201ENST00000443558 458 ntBASIC18.86■□□□□ 0.61
TCF4P15884 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.86■□□□□ 0.61
TCF4P15884 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.86■□□□□ 0.61
TCF4P15884 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
TCF4P15884 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.86■□□□□ 0.61
TCF4P15884 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TCF4P15884 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.86■□□□□ 0.61
TCF4P15884 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.86■□□□□ 0.61
TCF4P15884 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
TCF4P15884 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TCF4P15884 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.86■□□□□ 0.61
TCF4P15884 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.85■□□□□ 0.61
TCF4P15884 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.85■□□□□ 0.61
TCF4P15884 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.85■□□□□ 0.61
TCF4P15884 AC034232.1-201ENST00000506026 1064 ntBASIC18.85■□□□□ 0.61
TCF4P15884 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.85■□□□□ 0.61
TCF4P15884 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.85■□□□□ 0.61
TCF4P15884 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.85■□□□□ 0.61
TCF4P15884 AL136038.4-201ENST00000603606 1261 ntBASIC18.85■□□□□ 0.61
TCF4P15884 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.85■□□□□ 0.61
TCF4P15884 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.85■□□□□ 0.61
TCF4P15884 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TCF4P15884 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms