Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COL11A2P13942 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.01■■□□□ 1.11
COL11A2P13942 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COL11A2P13942 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22■■□□□ 1.11
COL11A2P13942 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22■■□□□ 1.11
COL11A2P13942 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
COL11A2P13942 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22■■□□□ 1.11
COL11A2P13942 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC22■■□□□ 1.11
COL11A2P13942 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
COL11A2P13942 ESPNP-201ENST00000270691 2015 ntBASIC22■■□□□ 1.11
COL11A2P13942 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22■■□□□ 1.11
COL11A2P13942 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22■■□□□ 1.11
COL11A2P13942 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
COL11A2P13942 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22■■□□□ 1.11
COL11A2P13942 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
COL11A2P13942 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22■■□□□ 1.11
COL11A2P13942 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22■■□□□ 1.11
COL11A2P13942 AC008667.4-201ENST00000607370 168 ntBASIC22■■□□□ 1.11
COL11A2P13942 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22■■□□□ 1.11
COL11A2P13942 AL589182.2-201ENST00000619332 1049 ntBASIC22■■□□□ 1.11
COL11A2P13942 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22■■□□□ 1.11
COL11A2P13942 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22■■□□□ 1.11
COL11A2P13942 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A2P13942 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A2P13942 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.99■■□□□ 1.11
COL11A2P13942 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A2P13942 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A2P13942 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A2P13942 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.99■■□□□ 1.11
COL11A2P13942 SLC4A1APP2-201ENST00000424054 1259 ntBASIC21.99■■□□□ 1.11
COL11A2P13942 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.99■■□□□ 1.11
COL11A2P13942 ADH5P3-201ENST00000433842 1137 ntBASIC21.99■■□□□ 1.11
COL11A2P13942 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A2P13942 PRYP5-201ENST00000451909 266 ntBASIC21.99■■□□□ 1.11
COL11A2P13942 AP000344.2-201ENST00000512987 629 ntBASIC21.99■■□□□ 1.11
COL11A2P13942 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.99■■□□□ 1.11
COL11A2P13942 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.99■■□□□ 1.11
COL11A2P13942 AC106028.4-201ENST00000614509 607 ntBASIC21.99■■□□□ 1.11
COL11A2P13942 AL805961.1-202ENST00000641562 540 ntBASIC21.99■■□□□ 1.11
COL11A2P13942 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A2P13942 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
COL11A2P13942 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
COL11A2P13942 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL11A2P13942 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 CLDN5-201ENST00000403084 2357 ntBASIC21.98■■□□□ 1.11
COL11A2P13942 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.98■■□□□ 1.11
COL11A2P13942 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.98■■□□□ 1.11
COL11A2P13942 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL11A2P13942 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL11A2P13942 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.98■■□□□ 1.11
COL11A2P13942 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A2P13942 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
COL11A2P13942 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A2P13942 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
COL11A2P13942 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
COL11A2P13942 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL11A2P13942 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A2P13942 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
COL11A2P13942 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.98■■□□□ 1.11
COL11A2P13942 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A2P13942 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 RPS15P9-201ENST00000494093 319 ntBASIC21.97■■□□□ 1.11
COL11A2P13942 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC21.97■■□□□ 1.11
COL11A2P13942 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
COL11A2P13942 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.97■■□□□ 1.11
COL11A2P13942 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A2P13942 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.97■■□□□ 1.11
COL11A2P13942 AC093028.1-201ENST00000622998 982 ntBASIC21.97■■□□□ 1.11
COL11A2P13942 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A2P13942 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.97■■□□□ 1.11
COL11A2P13942 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
COL11A2P13942 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
COL11A2P13942 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms