Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
COL4A2P08572 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.12■□□□□ 0.49
COL4A2P08572 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A2P08572 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
COL4A2P08572 AC006504.4-201ENST00000592118 1568 ntBASIC18.12■□□□□ 0.49
COL4A2P08572 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL4A2P08572 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
COL4A2P08572 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 AC254562.1-201ENST00000417586 456 ntBASIC18.12■□□□□ 0.49
COL4A2P08572 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A2P08572 PRYP5-201ENST00000451909 266 ntBASIC18.12■□□□□ 0.49
COL4A2P08572 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.12■□□□□ 0.49
COL4A2P08572 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL4A2P08572 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.11■□□□□ 0.49
COL4A2P08572 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.11■□□□□ 0.49
COL4A2P08572 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL4A2P08572 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL4A2P08572 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.11■□□□□ 0.49
COL4A2P08572 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.11■□□□□ 0.49
COL4A2P08572 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.11■□□□□ 0.49
COL4A2P08572 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COL4A2P08572 HTR5BP-201ENST00000430851 1154 ntBASIC18.11■□□□□ 0.49
COL4A2P08572 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.11■□□□□ 0.49
COL4A2P08572 HCG4B-203ENST00000450128 991 ntBASIC18.11■□□□□ 0.49
COL4A2P08572 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.11■□□□□ 0.49
COL4A2P08572 AC092865.6-201ENST00000642101 219 ntBASIC18.11■□□□□ 0.49
COL4A2P08572 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.11■□□□□ 0.49
COL4A2P08572 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL4A2P08572 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.11■□□□□ 0.49
COL4A2P08572 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.1■□□□□ 0.49
COL4A2P08572 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.1■□□□□ 0.49
COL4A2P08572 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.1■□□□□ 0.49
COL4A2P08572 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.1■□□□□ 0.49
COL4A2P08572 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.1■□□□□ 0.49
COL4A2P08572 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.1■□□□□ 0.49
COL4A2P08572 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL4A2P08572 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.1■□□□□ 0.49
COL4A2P08572 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.09■□□□□ 0.49
COL4A2P08572 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.09■□□□□ 0.49
COL4A2P08572 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.09■□□□□ 0.49
COL4A2P08572 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 AL513190.1-201ENST00000621254 727 ntBASIC18.09■□□□□ 0.49
COL4A2P08572 AC073592.5-201ENST00000624854 528 ntBASIC18.09■□□□□ 0.49
COL4A2P08572 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.09■□□□□ 0.49
COL4A2P08572 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.09■□□□□ 0.49
COL4A2P08572 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL4A2P08572 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.09■□□□□ 0.49
COL4A2P08572 RFPL4AP1-201ENST00000530883 850 ntBASIC18.09■□□□□ 0.49
COL4A2P08572 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.09■□□□□ 0.49
COL4A2P08572 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.09■□□□□ 0.49
COL4A2P08572 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.09■□□□□ 0.49
COL4A2P08572 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
COL4A2P08572 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
COL4A2P08572 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.08■□□□□ 0.49
COL4A2P08572 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
COL4A2P08572 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.08■□□□□ 0.48
COL4A2P08572 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL4A2P08572 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL4A2P08572 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
COL4A2P08572 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COL4A2P08572 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COL4A2P08572 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms