Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.05■□□□□ -0
CTSDP07339 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 AC133963.1-201ENST00000504166 1679 ntBASIC15.05■□□□□ -0
CTSDP07339 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.05■□□□□ -0
CTSDP07339 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.05■□□□□ -0
CTSDP07339 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CTSDP07339 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CTSDP07339 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CTSDP07339 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.05■□□□□ -0
CTSDP07339 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.05■□□□□ -0
CTSDP07339 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.04■□□□□ -0
CTSDP07339 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CTSDP07339 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
CTSDP07339 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.04■□□□□ -0
CTSDP07339 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.04■□□□□ -0
CTSDP07339 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CTSDP07339 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.04■□□□□ -0
CTSDP07339 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CTSDP07339 RPS2P4-201ENST00000476944 856 ntBASIC15.04■□□□□ -0
CTSDP07339 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.04■□□□□ -0
CTSDP07339 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.04■□□□□ -0
CTSDP07339 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CTSDP07339 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CTSDP07339 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CTSDP07339 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.04■□□□□ -0
CTSDP07339 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.04■□□□□ -0
CTSDP07339 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.03■□□□□ -0
CTSDP07339 GPAT2P1-201ENST00000444924 1672 ntBASIC15.03■□□□□ -0
CTSDP07339 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.03■□□□□ -0
CTSDP07339 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
CTSDP07339 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CTSDP07339 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
CTSDP07339 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CTSDP07339 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.03■□□□□ -0
CTSDP07339 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CTSDP07339 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CTSDP07339 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CTSDP07339 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CTSDP07339 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.03■□□□□ -0
CTSDP07339 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 AC008040.2-201ENST00000461049 708 ntBASIC15.03■□□□□ -0
CTSDP07339 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC15.03■□□□□ -0
CTSDP07339 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.03■□□□□ -0
CTSDP07339 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 AC130371.2-201ENST00000619443 611 ntBASIC15.03■□□□□ -0
CTSDP07339 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CTSDP07339 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CTSDP07339 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
CTSDP07339 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CTSDP07339 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CTSDP07339 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.02■□□□□ -0
CTSDP07339 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.02■□□□□ -0
CTSDP07339 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CTSDP07339 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CTSDP07339 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.02■□□□□ -0
CTSDP07339 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CTSDP07339 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CTSDP07339 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms