Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGN1P05114 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGN1P05114 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGN1P05114 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMGN1P05114 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGN1P05114 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGN1P05114 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGN1P05114 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGN1P05114 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGN1P05114 KRT18P23-201ENST00000435622 1283 ntBASIC16.41■□□□□ 0.22
HMGN1P05114 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGN1P05114 AC097488.1-201ENST00000507834 756 ntBASIC16.41■□□□□ 0.22
HMGN1P05114 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.41■□□□□ 0.22
HMGN1P05114 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.41■□□□□ 0.22
HMGN1P05114 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGN1P05114 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 CD177P1-201ENST00000606252 935 ntBASIC16.41■□□□□ 0.22
HMGN1P05114 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 AC139713.2-201ENST00000641328 2723 ntBASIC16.41■□□□□ 0.22
HMGN1P05114 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HMGN1P05114 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HMGN1P05114 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGN1P05114 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.4■□□□□ 0.22
HMGN1P05114 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 FAM197Y4-202ENST00000622692 608 ntBASIC16.4■□□□□ 0.22
HMGN1P05114 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HMGN1P05114 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HMGN1P05114 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGN1P05114 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.22
HMGN1P05114 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGN1P05114 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGN1P05114 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGN1P05114 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGN1P05114 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGN1P05114 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HMGN1P05114 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.39■□□□□ 0.21
HMGN1P05114 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.39■□□□□ 0.21
HMGN1P05114 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGN1P05114 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGN1P05114 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.39■□□□□ 0.21
HMGN1P05114 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HMGN1P05114 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
HMGN1P05114 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
HMGN1P05114 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGN1P05114 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.38■□□□□ 0.21
HMGN1P05114 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HMGN1P05114 AL023806.1-201ENST00000603994 1649 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms