Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFAP04085 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFAP04085 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFAP04085 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFAP04085 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 AL353692.3-201ENST00000407031 1396 ntBASIC16.91■□□□□ 0.3
PDGFAP04085 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFAP04085 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDGFAP04085 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFAP04085 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.91■□□□□ 0.3
PDGFAP04085 AP001005.1-201ENST00000571755 1248 ntBASIC16.91■□□□□ 0.3
PDGFAP04085 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDGFAP04085 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFAP04085 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PDGFAP04085 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFAP04085 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.91■□□□□ 0.3
PDGFAP04085 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFAP04085 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFAP04085 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PDGFAP04085 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFAP04085 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.9■□□□□ 0.3
PDGFAP04085 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFAP04085 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDGFAP04085 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFAP04085 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFAP04085 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFAP04085 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFAP04085 AC148477.8-201ENST00000624298 468 ntBASIC16.9■□□□□ 0.3
PDGFAP04085 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 FEM1AP3-201ENST00000403722 1741 ntBASIC16.9■□□□□ 0.3
PDGFAP04085 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PDGFAP04085 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFAP04085 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDGFAP04085 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDGFAP04085 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDGFAP04085 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFAP04085 IRX1P1-201ENST00000438849 1838 ntBASIC16.89■□□□□ 0.29
PDGFAP04085 AL138781.2-201ENST00000617896 1843 ntBASIC16.89■□□□□ 0.29
PDGFAP04085 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PDGFAP04085 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 PMS2P1-201ENST00000431037 1228 ntBASIC16.89■□□□□ 0.29
PDGFAP04085 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.89■□□□□ 0.29
PDGFAP04085 FAM197Y8-203ENST00000450145 560 ntBASIC16.89■□□□□ 0.29
PDGFAP04085 MINOS1P3-201ENST00000457048 203 ntBASIC16.89■□□□□ 0.29
PDGFAP04085 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFAP04085 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.89■□□□□ 0.29
PDGFAP04085 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFAP04085 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.89■□□□□ 0.29
PDGFAP04085 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.89■□□□□ 0.29
PDGFAP04085 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFAP04085 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.89■□□□□ 0.29
PDGFAP04085 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PDGFAP04085 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFAP04085 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFAP04085 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms